Ainsliaea affinis Miq. accepted as Ainsliaea acerifolia Sch.Bip. (original description)
Alfredia japonica Miq. accepted as Cirsium japonicum (Thunb.) Fisch. ex DC. (original description)
Amphirhapis japonica Miq. (original description)
Antennaria japonica Sch.Bip. accepted as Anaphalis margaritacea var. japonica (Sch.Bip.) Makino (original description)
Artemisia capillaris Miq. accepted as Artemisia scoparia Waldst. & Kitam. (original description)
Artemisia gilvescens Miq. (original description)
Artemisia keiskeana Miq. (original description)
Artemisia pedunculosa Miq. (original description)
Biotia japonica Miq. accepted as Aster miquelianus Hara (original description)
Cacalia nipponica Miq. accepted as Parasenecio nipponica (Miq.) H.Koyama (original description)
Carpesium rosulatum Miq. (original description)
Carpesium scandens Schult.f. ex Miq. accepted as Rhynchospermum verticillatum Reinw. ex Reinw. (original description)
Cirsium buergeri Miq. (original description)
Cirsium sieboldii Miq. (original description)
Crepis integra (Thunb.) Miq. accepted as Crepidiastrum lanceolatum (Houtt.) Nakai (original description)
Diaspananthus Miq. accepted as Ainsliaea DC. (original description)
Diaspananthus palmatus Miq. accepted as Diaspananthus uniflorus (Sch.Bip.) Kitam. (original description)
Echinops sphaerocephalus Miq. (original description)
Erigeron ciliaris Miq. accepted as Inula ciliaris (Miq.) Maxim. (original description)
Eupatorium rigidulum Miq. accepted as Pertya rigidula (Miq.) Makino (original description)
Inula involucrata Miq. (original description)
Ixeris lyrata (Thunb.) Miq. accepted as Youngia japonica (L.) DC. (original description)
Kalimeris microcephala Miq. accepted as Aster ovatus var. microcephalus (Miq.) Mot.Ito & Soejima (original description)
Lactuca sororia Miq. accepted as Paraprenanthes sororia (Miq.) C.Shih (original description)
Lactuca squarrosa (Thunb.) Miq. accepted as Lactuca indica L. (original description)
Lappa edulis Siebold ex Miq. (original description)
Leontopodium japonicum (Thunb.) Miq. (original description)
Petasites spurius Miq. accepted as Petasites japonicus (Siebold & Zucc.) Maxim. (original description)
Saussurea nipponica Miq. (original description)
Senecio nikoensis Miq. (original description)
Senecio pierotii Miq. (original description)
Serratula tinctoria Siebold ex Miq. (original description)
Tanacetum marginatum (Miq.) Miq. (original description)